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dotnet core only works in Visual studio

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We have an interesting issue where after upgrading to Visual studio 2017, a dotnet core application we have only works when using the build/debug feature in visual studio.

On clicking the arrow, the program successfully launches dotnet.exe and runs the program. If I use dotnet run, outside of visual studio, then dotnet.exe crashes and tries to open a debugger.

I have checked all versions (we are explicitly specifying the use of 1.1.1) and they are installed and correct. I have attempted both x86 and x64.

Does anyone know what settings might exist that allow dotnet core to function only within visual studio but not when run independently?

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